Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs34289983 | chr5:79931282 | C/CA | 0.000149 | 209 | 19.3 | 14.83 | 9.77 | KM Plot |
| KIRP | rs34314126 | chr3:100041603 | G/A | 2.38E-5 | 209 | 16.43 | 18.47 | 4.67 | KM Plot |
| KIRP | rs34317321 | chr16:20443590 | T/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
| KIRP | rs34332197 | chr16:20446499 | C/T | 0.000407 | 211 | 16.43 | 13.6 | 1.73 | KM Plot |
| KIRP | rs34332556 | chr6:27357414 | C/G | 1.25E-6 | 213 | 17.13 | 11.58 | 7.32 | KM Plot |
| KIRP | rs34371502 | chr6:28081758 | T/C | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs34384409 | chr3:99974015 | A/G | 8.89E-6 | 213 | 16.7 | 17.8 | 4.67 | KM Plot |
| KIRP | rs34408623 | chr16:644824 | T/TC | 7.98E-5 | 208 | 16.53 | 14.7 | 6.57 | KM Plot |
| KIRP | rs34409918 | chr6:27685348 | A/G | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs34413282 | chr11:8511569 | C/T | 0.000466 | 214 | 16.43 | 17.2 | 4.82 | KM Plot |
| KIRP | rs34413622 | chr11:8511641 | C/T | 0.000487 | 213 | 15.88 | 17.2 | 4.82 | KM Plot |
| KIRP | rs34421870 | chr10:102004175 | C/T | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs34428576 | chr10:12281111 | G/A | 1.22E-5 | 210 | 16.43 | 16.93 | 9.07 | KM Plot |
| KIRP | rs34432857 | chr6:27685825 | G/A | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs34436535 | chr6:26370365 | G/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |